Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
TGCT rs73226605 chr7:127777374 C/A 2.11E-9 133 42.18 37.53 12.55 KM Plot
TGCT rs73226606 chr7:127777441 G/A 2.11E-9 133 42.18 37.53 12.55 KM Plot
TGCT rs73226609 chr7:127778789 C/T 2.11E-9 133 42.18 37.53 12.55 KM Plot
TGCT rs73226610 chr7:127779096 A/G 2.11E-9 133 42.18 37.53 12.55 KM Plot
TGCT rs73226611 chr7:127779316 A/G 2.11E-9 133 42.18 37.53 12.55 KM Plot
TGCT rs73226612 chr7:127779703 G/A 1.24E-13 134 43.68 37.1 17.1 KM Plot
TGCT rs73226613 chr7:127781395 A/G 2.11E-9 133 42.18 37.53 12.55 KM Plot
TGCT rs73226614 chr7:127781488 G/A 2.11E-9 133 42.18 37.53 12.55 KM Plot
TGCT rs73226616 chr7:127782035 T/G 2.11E-9 133 42.18 37.53 12.55 KM Plot
TGCT rs73226620 chr7:127788082 T/G 1.8E-9 134 43.68 37.32 12.55 KM Plot
TGCT rs73227958 chr12:122149021 C/T 7.72E-5 132 46.53 34.45 10.62 KM Plot
TGCT rs73238099 chr7:127718888 C/G 1.42E-13 133 43.68 37.32 17.1 KM Plot
TGCT rs73238100 chr7:127720750 G/A 1.42E-13 133 43.68 37.32 17.1 KM Plot
TGCT rs73239707 chr7:127740460 T/C 1.27E-13 134 43.68 37.1 17.1 KM Plot
TGCT rs73239713 chr7:127754659 T/C 1.25E-13 133 45.47 36.23 17.1 KM Plot